Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 MTDHP3-201ENST00000594186 672 ntBASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 PMPCAP1-201ENST00000508114 1576 ntBASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM200CA6NKL6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 MRPL3P1-201ENST00000400109 1033 ntBASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 AC019129.2-201ENST00000609837 1235 ntBASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM200CA6NKL6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 AC103564.2-201ENST00000432853 1299 ntBASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 SLC25A6P4-201ENST00000586535 553 ntBASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM200CA6NKL6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM200CA6NKL6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM200CA6NKL6 BX276092.7-203ENST00000637198 1536 ntBASIC16.3■□□□□ 0.2
TMEM200CA6NKL6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM200CA6NKL6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM200CA6NKL6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms