Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRGV5A0A0B4J1U4 NCF1C-201ENST00000438382 1427 ntBASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 PMS2P7-201ENST00000506558 1336 ntBASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 KRT18P27-201ENST00000427733 1299 ntBASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 AC136632.2-201ENST00000512891 861 ntBASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 UNC93B6-202ENST00000528242 690 ntBASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 AC027601.4-201ENST00000611259 610 ntBASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.77■□□□□ 0.12
TRGV5A0A0B4J1U4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRGV5A0A0B4J1U4 BICD1-207ENST00000551848 1962 ntBASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 AC034105.1-201ENST00000563488 319 ntBASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 AC004706.3-202ENST00000621574 984 ntBASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV5A0A0B4J1U4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 AC009336.1-201ENST00000608941 1553 ntBASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV5A0A0B4J1U4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms