Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 RCN1P1-201ENST00000400413 996 ntBASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.98■□□□□ 0.31
AP4B1Q9Y6B7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 AC073508.3-201ENST00000619697 1419 ntBASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 AC010203.1-204ENST00000548782 407 ntBASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.97■□□□□ 0.31
AP4B1Q9Y6B7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 AL513477.1-201ENST00000602865 2407 ntBASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 LINC02199-201ENST00000506655 2702 ntBASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 AL023284.2-201ENST00000405850 579 ntBASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 MCCD1P1-208ENST00000445732 328 ntBASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 KRT18P21-201ENST00000515767 1272 ntBASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 AL138966.2-201ENST00000621997 464 ntBASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4B1Q9Y6B7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4B1Q9Y6B7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms