Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 AC093512.1-201ENST00000617969 520 ntBASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 AC105339.1-204ENST00000636249 355 ntBASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 AC068137.2-201ENST00000605408 478 ntBASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC2Q9Y5Z7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 BCRP1-201ENST00000444246 691 ntBASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 AC002558.1-201ENST00000488906 803 ntBASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 AC093677.2-201ENST00000600169 1863 ntBASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC2Q9Y5Z7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 HLA-J-203ENST00000494367 1087 ntBASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 AL096865.1-201ENST00000606796 927 ntBASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 REXO1L3P-201ENST00000622202 1288 ntBASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 WIZP1-201ENST00000531444 2299 ntBASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 AC135776.1-201ENST00000319817 2481 ntBASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HCFC2Q9Y5Z7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms