Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 SDHAP2-201ENST00000455183 2001 ntBASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 AC138894.3-201ENST00000603787 634 ntBASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 AL031008.1-201ENST00000619963 541 ntBASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 HTR7P1-202ENST00000624664 4411 ntBASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB3Q9Y5E6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 AC099336.1-202ENST00000602961 463 ntBASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB3Q9Y5E6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 PP12613-201ENST00000424958 2230 ntBASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB3Q9Y5E6 IGHV3-47-201ENST00000425060 335 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms