Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 AC091607.1-201ENST00000490318 1060 ntBASIC17.73■□□□□ 0.43
PKP3Q9Y446 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 AC012615.1-201ENST00000565797 1299 ntBASIC17.73■□□□□ 0.43
PKP3Q9Y446 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 AP005901.3-202ENST00000581653 237 ntBASIC17.73■□□□□ 0.43
PKP3Q9Y446 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PKP3Q9Y446 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKP3Q9Y446 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 AC010460.3-201ENST00000511359 1579 ntBASIC17.72■□□□□ 0.43
PKP3Q9Y446 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 COX5BP2-201ENST00000392354 334 ntBASIC17.72■□□□□ 0.43
PKP3Q9Y446 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 AC007967.3-201ENST00000434308 558 ntBASIC17.72■□□□□ 0.43
PKP3Q9Y446 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.72■□□□□ 0.43
PKP3Q9Y446 NSUN5P1-202ENST00000421140 1535 ntBASIC17.72■□□□□ 0.43
PKP3Q9Y446 NSUN5P2-203ENST00000457352 1529 ntBASIC17.72■□□□□ 0.43
PKP3Q9Y446 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKP3Q9Y446 AL355312.1-201ENST00000407115 2176 ntBASIC17.72■□□□□ 0.43
PKP3Q9Y446 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 HCG4P8-203ENST00000443049 980 ntBASIC17.71■□□□□ 0.43
PKP3Q9Y446 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 LINC01451-201ENST00000623792 534 ntBASIC17.71■□□□□ 0.43
PKP3Q9Y446 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP3Q9Y446 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
PKP3Q9Y446 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PKP3Q9Y446 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms