Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 AC113404.2-201ENST00000507884 177 ntBASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 AC024243.1-201ENST00000609234 778 ntBASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 LYSMD4-203ENST00000378904 2122 ntBASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 PVRIG2P-201ENST00000435460 978 ntBASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 AP003071.4-201ENST00000562276 1284 ntBASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 MIR3917-201ENST00000580971 93 ntBASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 AC092865.7-201ENST00000641832 219 ntBASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 PCDHB19P-201ENST00000570871 2371 ntBASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 KRT8P47-201ENST00000604727 1398 ntBASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
UBE2D4Q9Y2X8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.28□□□□□ -0.44
UBE2D4Q9Y2X8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms