Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHMP2BQ9UQN3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 AL121761.2-201ENST00000598007 1648 ntBASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMP2BQ9UQN3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMP2BQ9UQN3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 AL596275.1-201ENST00000423464 877 ntBASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP2BQ9UQN3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP2BQ9UQN3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP2BQ9UQN3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP2BQ9UQN3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP2BQ9UQN3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 SPDYE15P-201ENST00000424157 909 ntBASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms