Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 BCAR1-209ENST00000546196 1340 ntBASIC22.91■■□□□ 1.26
SPG7Q9UQ90 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 CNN2P11-201ENST00000429351 262 ntBASIC22.91■■□□□ 1.26
SPG7Q9UQ90 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 RHOQP3-201ENST00000437982 621 ntBASIC22.91■■□□□ 1.26
SPG7Q9UQ90 CEND1P1-201ENST00000451006 455 ntBASIC22.91■■□□□ 1.26
SPG7Q9UQ90 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 KRT19P2-202ENST00000557173 1012 ntBASIC22.91■■□□□ 1.26
SPG7Q9UQ90 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 REXO1L9P-201ENST00000604264 2108 ntBASIC22.91■■□□□ 1.26
SPG7Q9UQ90 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SPG7Q9UQ90 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 SMN2-210ENST00000511812 867 ntTSL 2 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
SPG7Q9UQ90 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
SPG7Q9UQ90 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SPG7Q9UQ90 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SPG7Q9UQ90 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SPG7Q9UQ90 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.89■■□□□ 1.26
SPG7Q9UQ90 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 AP000997.3-201ENST00000623333 2250 ntBASIC22.89■■□□□ 1.25
SPG7Q9UQ90 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SPG7Q9UQ90 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 ACTG1P4-201ENST00000425123 1122 ntBASIC22.88■■□□□ 1.25
SPG7Q9UQ90 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms