Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC069262.1-201ENST00000539058 672 ntBASIC23.82■■□□□ 1.4
PHF8Q9UPP1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC23.82■■□□□ 1.4
PHF8Q9UPP1 AC099522.2-201ENST00000607001 744 ntBASIC23.82■■□□□ 1.4
PHF8Q9UPP1 AC026120.1-201ENST00000611536 926 ntBASIC23.82■■□□□ 1.4
PHF8Q9UPP1 Z92544.3-201ENST00000624747 417 ntBASIC23.82■■□□□ 1.4
PHF8Q9UPP1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PHF8Q9UPP1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PHF8Q9UPP1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.82■■□□□ 1.4
PHF8Q9UPP1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PHF8Q9UPP1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PHF8Q9UPP1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.81■■□□□ 1.4
PHF8Q9UPP1 AC002056.1-201ENST00000395613 760 ntBASIC23.81■■□□□ 1.4
PHF8Q9UPP1 AL355306.1-201ENST00000415580 579 ntBASIC23.81■■□□□ 1.4
PHF8Q9UPP1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 NMU-203ENST00000507338 658 ntTSL 3 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 AJ011932.1-201ENST00000621707 465 ntBASIC23.81■■□□□ 1.4
PHF8Q9UPP1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.81■■□□□ 1.4
PHF8Q9UPP1 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.81■■□□□ 1.4
PHF8Q9UPP1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 SLC25A6P2-201ENST00000497974 877 ntBASIC23.8■■□□□ 1.4
PHF8Q9UPP1 KRT8P48-201ENST00000515599 1220 ntBASIC23.8■■□□□ 1.4
PHF8Q9UPP1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 AC079416.2-201ENST00000625035 1193 ntBASIC23.8■■□□□ 1.4
PHF8Q9UPP1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHF8Q9UPP1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 AC067863.1-201ENST00000494933 530 ntBASIC23.79■■□□□ 1.4
PHF8Q9UPP1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.79■■□□□ 1.4
PHF8Q9UPP1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 AL671277.1-201ENST00000429656 993 ntBASIC23.78■■□□□ 1.4
PHF8Q9UPP1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.78■■□□□ 1.4
PHF8Q9UPP1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms