Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 AC010507.1-201ENST00000633895 436 ntBASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC9Q9UKV0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 AC009336.1-201ENST00000608941 1553 ntBASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 AL353135.1-201ENST00000606729 504 ntBASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.02■□□□□ 0.96
HDAC9Q9UKV0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDAC9Q9UKV0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
HDAC9Q9UKV0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HDAC9Q9UKV0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.02■□□□□ 0.95
HDAC9Q9UKV0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 KRT19P2-202ENST00000557173 1012 ntBASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 AC007064.4-201ENST00000637740 555 ntBASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC9Q9UKV0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 LINC00982-205ENST00000420957 435 ntBASIC21■□□□□ 0.95
HDAC9Q9UKV0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 AC106028.4-201ENST00000614509 607 ntBASIC21■□□□□ 0.95
HDAC9Q9UKV0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC9Q9UKV0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
HDAC9Q9UKV0 CROCCP3-202ENST00000420820 1947 ntBASIC21■□□□□ 0.95
HDAC9Q9UKV0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 MYCLP1-201ENST00000372451 1075 ntBASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 RHOQP3-201ENST00000437982 621 ntBASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 ACTG1P14-201ENST00000446382 1122 ntBASIC20.99■□□□□ 0.95
HDAC9Q9UKV0 AL031432.2-201ENST00000566714 459 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms