Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC116562.4-201ENST00000641316 2276 ntBASIC22.27■■□□□ 1.16
CCNL1Q9UK58 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 AL592309.1-201ENST00000443127 649 ntBASIC22.27■■□□□ 1.16
CCNL1Q9UK58 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 AC069335.1-201ENST00000489972 472 ntBASIC22.27■■□□□ 1.16
CCNL1Q9UK58 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 FAM86C2P-203ENST00000528684 1004 ntBASIC22.27■■□□□ 1.16
CCNL1Q9UK58 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.27■■□□□ 1.16
CCNL1Q9UK58 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.27■■□□□ 1.15
CCNL1Q9UK58 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCNL1Q9UK58 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 UGT1A2P-201ENST00000454886 866 ntBASIC22.26■■□□□ 1.15
CCNL1Q9UK58 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 TUBB3P1-201ENST00000405796 1332 ntBASIC22.26■■□□□ 1.15
CCNL1Q9UK58 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNL1Q9UK58 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 TFAMP1-201ENST00000412727 736 ntBASIC22.25■■□□□ 1.15
CCNL1Q9UK58 KRT18P32-201ENST00000424695 1287 ntBASIC22.25■■□□□ 1.15
CCNL1Q9UK58 AC002558.1-201ENST00000488906 803 ntBASIC22.25■■□□□ 1.15
CCNL1Q9UK58 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 AL096828.2-201ENST00000567259 1965 ntBASIC22.25■■□□□ 1.15
CCNL1Q9UK58 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNL1Q9UK58 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 FAM58DP-201ENST00000428076 619 ntBASIC22.24■■□□□ 1.15
CCNL1Q9UK58 KLF2P3-201ENST00000451977 1087 ntBASIC22.24■■□□□ 1.15
CCNL1Q9UK58 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 AC079140.1-201ENST00000508039 487 ntBASIC22.24■■□□□ 1.15
CCNL1Q9UK58 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 AL512356.2-201ENST00000546955 174 ntBASIC22.24■■□□□ 1.15
CCNL1Q9UK58 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNL1Q9UK58 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNL1Q9UK58 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNL1Q9UK58 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNL1Q9UK58 CYP51A1P2-201ENST00000419457 1499 ntBASIC22.23■■□□□ 1.15
CCNL1Q9UK58 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNL1Q9UK58 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms