Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NIPSNAP3AQ9UFN0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 INGX-201ENST00000359239 846 ntBASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC128688.1-201ENST00000487626 519 ntBASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 EGLN1P1-201ENST00000531623 762 ntBASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPSNAP3AQ9UFN0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 TMEM191A-211ENST00000637163 1067 ntBASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 REXO1L11P-201ENST00000620964 1927 ntBASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPSNAP3AQ9UFN0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC008550.1-201ENST00000511500 884 ntBASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPSNAP3AQ9UFN0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 1069 ms