Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 AL136038.3-201ENST00000561909 1096 ntBASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 AC011498.5-201ENST00000592027 486 ntBASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS29Q9UBQ0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 RN7SL606P-201ENST00000472779 293 ntBASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS29Q9UBQ0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 LYSMD4-203ENST00000378904 2122 ntBASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AC012313.1-201ENST00000593393 3059 ntBASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AP001094.4-201ENST00000579008 2176 ntBASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 COX5BP2-201ENST00000392354 334 ntBASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AC090616.6-201ENST00000582640 721 ntBASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VPS29Q9UBQ0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms