Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AL590787.1-201ENST00000568856 1315 ntBASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AL671277.1-201ENST00000429656 993 ntBASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 IGHV3-52-201ENST00000519770 353 ntBASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXXC1Q9P0U4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 AC002056.1-201ENST00000395613 760 ntBASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 AC069335.1-201ENST00000489972 472 ntBASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXXC1Q9P0U4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 TUBB3P1-201ENST00000405796 1332 ntBASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 AL592309.1-201ENST00000443127 649 ntBASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 SPDYE11-202ENST00000450699 704 ntBASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 SPDYE9P-201ENST00000570642 692 ntBASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 SPDYE10P-202ENST00000612005 668 ntBASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 SPDYE8P-202ENST00000612377 668 ntBASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CXXC1Q9P0U4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXXC1Q9P0U4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXXC1Q9P0U4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CXXC1Q9P0U4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms