Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AC063952.2-201ENST00000498792 1227 ntBASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AL049597.2-201ENST00000565575 961 ntBASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 MIR3917-201ENST00000580971 93 ntBASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AC100803.2-201ENST00000562459 1963 ntBASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 STARP1-201ENST00000397973 869 ntBASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 AC022616.7-201ENST00000525383 220 ntBASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 LINC00304-203ENST00000565008 1864 ntBASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.69□□□□□ -0.06
LIN7CQ9NUP9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms