Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 TERF1P1-201ENST00000311003 1181 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 MIR662-201ENST00000384847 95 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 SLC25A1P3-201ENST00000395415 828 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 AC117947.1-201ENST00000427448 529 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 LIN28AP1-201ENST00000429574 405 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 ATP5G1P1-201ENST00000448724 379 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 AP003733.1-201ENST00000491725 852 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 AC012306.2-201ENST00000609350 630 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 AL031432.5-201ENST00000641059 760 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 AC016396.2-201ENST00000562575 1417 ntBASIC16.62■□□□□ 0.25
SLC6A13Q9NSD5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 FLJ38576-201ENST00000623820 2459 ntBASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 AC010460.3-201ENST00000511359 1579 ntBASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 AC090340.1-201ENST00000620778 4980 ntBASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A13Q9NSD5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 HBZP1-201ENST00000354915 429 ntBASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 AC113347.1-201ENST00000413321 391 ntBASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 VENTXP5-201ENST00000523979 775 ntBASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 GPR32P1-201ENST00000601788 811 ntBASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 HYMAI.1-201ENST00000620949 238 ntBASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 AC005915.1-201ENST00000624912 2018 ntBASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A13Q9NSD5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
SLC6A13Q9NSD5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms