Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR9Q9NR96 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.63■□□□□ 0.57
TLR9Q9NR96 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
TLR9Q9NR96 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 KRT19P2-202ENST00000557173 1012 ntBASIC18.62■□□□□ 0.57
TLR9Q9NR96 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 GGTLC5P-201ENST00000617623 998 ntBASIC18.62■□□□□ 0.57
TLR9Q9NR96 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TLR9Q9NR96 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR9Q9NR96 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 AP002414.1-201ENST00000391405 1147 ntBASIC18.61■□□□□ 0.57
TLR9Q9NR96 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 PTCHD3P3-201ENST00000403073 906 ntBASIC18.61■□□□□ 0.57
TLR9Q9NR96 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 AC027612.4-201ENST00000605371 583 ntBASIC18.61■□□□□ 0.57
TLR9Q9NR96 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 AC097637.2-201ENST00000624096 1997 ntBASIC18.61■□□□□ 0.57
TLR9Q9NR96 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR9Q9NR96 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR9Q9NR96 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 ACTG1P14-201ENST00000446382 1122 ntBASIC18.6■□□□□ 0.57
TLR9Q9NR96 AP000344.2-201ENST00000512987 629 ntBASIC18.6■□□□□ 0.57
TLR9Q9NR96 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 STK25P1-201ENST00000585406 838 ntBASIC18.6■□□□□ 0.57
TLR9Q9NR96 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 AC116407.2-201ENST00000613639 860 ntBASIC18.6■□□□□ 0.57
TLR9Q9NR96 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 CROCCP3-202ENST00000420820 1947 ntBASIC18.6■□□□□ 0.57
TLR9Q9NR96 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TLR9Q9NR96 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TLR9Q9NR96 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.59■□□□□ 0.57
TLR9Q9NR96 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TLR9Q9NR96 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms