Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 B3GAT3P1-201ENST00000471720 806 ntBASIC15.26■□□□□ 0.03
IFT46Q9NQC8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 AC007326.2-201ENST00000624224 7579 ntBASIC15.26■□□□□ 0.03
IFT46Q9NQC8 AC036111.1-201ENST00000533973 1582 ntBASIC15.26■□□□□ 0.03
IFT46Q9NQC8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.26■□□□□ 0.03
IFT46Q9NQC8 HYMAI-201ENST00000635591 3347 ntBASIC15.26■□□□□ 0.03
IFT46Q9NQC8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFT46Q9NQC8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 AC011506.1-201ENST00000474329 610 ntBASIC15.25■□□□□ 0.03
IFT46Q9NQC8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 AC005052.1-201ENST00000625181 2492 ntBASIC15.25■□□□□ 0.03
IFT46Q9NQC8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
IFT46Q9NQC8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 KRT18P23-201ENST00000435622 1283 ntBASIC15.24■□□□□ 0.03
IFT46Q9NQC8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 AP000692.2-201ENST00000608391 879 ntBASIC15.24■□□□□ 0.03
IFT46Q9NQC8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 FSCN1P1-201ENST00000568912 1481 ntBASIC15.24■□□□□ 0.03
IFT46Q9NQC8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFT46Q9NQC8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms