Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 RCN1P1-201ENST00000400413 996 ntBASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AL671277.2-201ENST00000458060 996 ntBASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 DUX4L26-201ENST00000489078 1255 ntBASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 VENTXP5-201ENST00000523979 775 ntBASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 AC009949.1-201ENST00000623048 1830 ntBASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC68Q9H2F9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 DDX43P3-201ENST00000441064 443 ntBASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 AC112698.1-201ENST00000510299 916 ntBASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 AC005332.3-201ENST00000589904 676 ntBASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 AL355312.1-201ENST00000407115 2176 ntBASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC68Q9H2F9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC68Q9H2F9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC68Q9H2F9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC68Q9H2F9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC68Q9H2F9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 HYMAI.1-201ENST00000620949 238 ntBASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms