Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 AC243562.1-201ENST00000560672 389 ntBASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF541Q9H0D2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF541Q9H0D2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 FAM86C2P-203ENST00000528684 1004 ntBASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF541Q9H0D2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 AC009949.1-201ENST00000623048 1830 ntBASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 AC140658.5-201ENST00000438532 169 ntBASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF541Q9H0D2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 ACTG1P4-201ENST00000425123 1122 ntBASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 AL135744.1-201ENST00000565098 629 ntBASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 BX276092.7-203ENST00000637198 1536 ntBASIC20.93■□□□□ 0.94
ZNF541Q9H0D2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 RBPMS2P1-201ENST00000437762 623 ntBASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 CRB3P1-201ENST00000449338 276 ntBASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 RN7SL589P-201ENST00000481268 310 ntBASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 IGHV3-42-201ENST00000520410 361 ntBASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.92■□□□□ 0.94
ZNF541Q9H0D2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms