Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP4Q9C0A0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CNTNAP4Q9C0A0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 FAM86C2P-203ENST00000528684 1004 ntBASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 DUX4L27-201ENST00000554796 1261 ntBASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 AC051619.7-201ENST00000568314 623 ntBASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNTNAP4Q9C0A0 AC135776.1-201ENST00000319817 2481 ntBASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNTNAP4Q9C0A0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 PMS2P4-201ENST00000412466 1052 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 CNN2P2-201ENST00000443536 909 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 CNN2P3-201ENST00000450201 906 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 RNA5SP421-201ENST00000516864 134 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 AC107918.2-201ENST00000530817 355 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 AC069262.1-201ENST00000539058 672 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 AL136317.3-201ENST00000618497 906 ntBASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNTNAP4Q9C0A0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AL020996.1-203ENST00000536896 2307 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 AC046185.3-201ENST00000623228 1824 ntBASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNTNAP4Q9C0A0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms