Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 KLF4P1-201ENST00000412782 1185 ntBASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 KRT18P2-201ENST00000447938 1258 ntBASIC18.36■□□□□ 0.53
LRRC3Q9BY71 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AC108751.1-201ENST00000490852 363 ntBASIC18.36■□□□□ 0.53
LRRC3Q9BY71 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 LETM1P2-201ENST00000597330 2178 ntBASIC18.35■□□□□ 0.53
LRRC3Q9BY71 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 BX276092.7-203ENST00000637198 1536 ntBASIC18.35■□□□□ 0.53
LRRC3Q9BY71 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 GPX1P2-201ENST00000429271 606 ntBASIC18.35■□□□□ 0.53
LRRC3Q9BY71 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 AC092183.1-201ENST00000469884 875 ntBASIC18.35■□□□□ 0.53
LRRC3Q9BY71 RNA5SP416-201ENST00000516838 111 ntBASIC18.35■□□□□ 0.53
LRRC3Q9BY71 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 AC116407.2-201ENST00000613639 860 ntBASIC18.35■□□□□ 0.53
LRRC3Q9BY71 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 AP000997.3-201ENST00000623333 2250 ntBASIC18.35■□□□□ 0.53
LRRC3Q9BY71 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
LRRC3Q9BY71 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 REXO1L9P-201ENST00000604264 2108 ntBASIC18.34■□□□□ 0.53
LRRC3Q9BY71 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AC004832.2-201ENST00000426397 482 ntBASIC18.34■□□□□ 0.53
LRRC3Q9BY71 SIGLEC30P-201ENST00000455569 941 ntBASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AC112482.1-201ENST00000492080 688 ntBASIC18.34■□□□□ 0.53
LRRC3Q9BY71 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AC010327.4-202ENST00000591484 748 ntBASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AC064836.3-201ENST00000607928 673 ntBASIC18.34■□□□□ 0.53
LRRC3Q9BY71 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC3Q9BY71 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC3Q9BY71 NCF1C-201ENST00000438382 1427 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms