Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NPAS2Q99743 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS2Q99743 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS2Q99743 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS2Q99743 AC005332.1-201ENST00000577698 1310 ntBASIC17.28■□□□□ 0.36
NPAS2Q99743 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
NPAS2Q99743 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPAS2Q99743 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NPAS2Q99743 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 SPDYE13P-201ENST00000445314 798 ntBASIC17.28■□□□□ 0.36
NPAS2Q99743 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS2Q99743 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPAS2Q99743 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
NPAS2Q99743 AC091076.1-201ENST00000610741 619 ntBASIC17.28■□□□□ 0.36
NPAS2Q99743 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPAS2Q99743 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
NPAS2Q99743 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPAS2Q99743 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS2Q99743 AC018695.7-201ENST00000624587 2492 ntBASIC17.28■□□□□ 0.36
NPAS2Q99743 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS2Q99743 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
NPAS2Q99743 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPAS2Q99743 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPAS2Q99743 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS2Q99743 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.27■□□□□ 0.36
NPAS2Q99743 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS2Q99743 AL024508.2-201ENST00000607749 1894 ntBASIC17.27■□□□□ 0.36
NPAS2Q99743 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.27■□□□□ 0.36
NPAS2Q99743 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NPAS2Q99743 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 RASA4DP-201ENST00000460726 1199 ntBASIC17.27■□□□□ 0.36
NPAS2Q99743 AC092597.1-201ENST00000487352 616 ntBASIC17.27■□□□□ 0.36
NPAS2Q99743 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.27■□□□□ 0.36
NPAS2Q99743 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.27■□□□□ 0.36
NPAS2Q99743 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.27■□□□□ 0.36
NPAS2Q99743 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 AP000550.4-202ENST00000639755 178 ntBASIC17.27■□□□□ 0.36
NPAS2Q99743 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NPAS2Q99743 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS2Q99743 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS2Q99743 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS2Q99743 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS2Q99743 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS2Q99743 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NPAS2Q99743 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NPAS2Q99743 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NPAS2Q99743 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NPAS2Q99743 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NPAS2Q99743 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NPAS2Q99743 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NPAS2Q99743 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NPAS2Q99743 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NPAS2Q99743 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 UPK3BP1-201ENST00000428678 509 ntBASIC17.26■□□□□ 0.35
NPAS2Q99743 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS2Q99743 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS2Q99743 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS2Q99743 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS2Q99743 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms