Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFI1Q99684 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GFI1Q99684 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1Q99684 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1Q99684 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GFI1Q99684 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.21■□□□□ 0.03
GFI1Q99684 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1Q99684 AC142381.4-202ENST00000563973 229 ntBASIC15.21■□□□□ 0.03
GFI1Q99684 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.21■□□□□ 0.03
GFI1Q99684 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFI1Q99684 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.21■□□□□ 0.03
GFI1Q99684 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.21■□□□□ 0.03
GFI1Q99684 AC092865.7-201ENST00000641832 219 ntBASIC15.21■□□□□ 0.03
GFI1Q99684 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.21■□□□□ 0.03
GFI1Q99684 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
GFI1Q99684 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.21■□□□□ 0.03
GFI1Q99684 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.21■□□□□ 0.03
GFI1Q99684 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1Q99684 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.21■□□□□ 0.03
GFI1Q99684 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GFI1Q99684 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
GFI1Q99684 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GFI1Q99684 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GFI1Q99684 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.21■□□□□ 0.02
GFI1Q99684 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GFI1Q99684 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GFI1Q99684 AC026691.1-201ENST00000602502 2017 ntBASIC15.21■□□□□ 0.02
GFI1Q99684 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 AC008741.2-201ENST00000612792 3115 ntBASIC15.2■□□□□ 0.02
GFI1Q99684 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 AC006449.5-201ENST00000610658 2098 ntBASIC15.2■□□□□ 0.02
GFI1Q99684 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 TSPY14P-201ENST00000303979 915 ntBASIC15.2■□□□□ 0.02
GFI1Q99684 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.2■□□□□ 0.02
GFI1Q99684 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.2■□□□□ 0.02
GFI1Q99684 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.2■□□□□ 0.02
GFI1Q99684 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GFI1Q99684 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GFI1Q99684 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.2■□□□□ 0.02
GFI1Q99684 AC093525.9-201ENST00000624961 1746 ntBASIC15.2■□□□□ 0.02
GFI1Q99684 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
GFI1Q99684 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
GFI1Q99684 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.2■□□□□ 0.02
GFI1Q99684 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFI1Q99684 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.19■□□□□ 0.02
GFI1Q99684 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.19■□□□□ 0.02
GFI1Q99684 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.19■□□□□ 0.02
GFI1Q99684 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.19■□□□□ 0.02
GFI1Q99684 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.19■□□□□ 0.02
GFI1Q99684 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GFI1Q99684 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFI1Q99684 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.19■□□□□ 0.02
GFI1Q99684 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms