Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 AC093010.1-201ENST00000473625 1624 ntBASIC22.49■■□□□ 1.19
TUBGCP6Q96RT7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 ABALON-201ENST00000629058 1903 ntBASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 OR7E47P-204ENST00000575924 449 ntBASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 AF228730.6-201ENST00000641497 218 ntBASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 AC084121.3-201ENST00000641716 218 ntBASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 AC105233.6-201ENST00000642093 218 ntBASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
TUBGCP6Q96RT7 NMU-203ENST00000507338 658 ntTSL 3 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AC004449.1-201ENST00000564240 433 ntBASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AC132938.5-201ENST00000624980 1813 ntBASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AC005034.1-201ENST00000426657 489 ntBASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AC093520.2-201ENST00000561830 333 ntBASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TUBGCP6Q96RT7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 AC236430.1-201ENST00000402231 743 ntBASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 AC015922.1-201ENST00000421102 1152 ntBASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 AL020989.1-201ENST00000422979 469 ntBASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 MIR4745-201ENST00000577608 62 ntBASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 SIRPAP1-201ENST00000448467 1770 ntBASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TUBGCP6Q96RT7 AL627223.1-201ENST00000416693 442 ntBASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 ACTG1P14-201ENST00000446382 1122 ntBASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 FAM86GP-201ENST00000448322 971 ntBASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
TUBGCP6Q96RT7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
TUBGCP6Q96RT7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TUBGCP6Q96RT7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.45■■□□□ 1.18
TUBGCP6Q96RT7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TUBGCP6Q96RT7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.45■■□□□ 1.18
TUBGCP6Q96RT7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TUBGCP6Q96RT7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TUBGCP6Q96RT7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms