Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 GMCL1P1-201ENST00000463439 1581 ntBASIC13.38□□□□□ -0.27
AP1S3Q96PC3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 KRT17P3-201ENST00000420566 1262 ntBASIC13.38□□□□□ -0.27
AP1S3Q96PC3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 KRT16P5-201ENST00000455284 522 ntBASIC13.38□□□□□ -0.27
AP1S3Q96PC3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP1S3Q96PC3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 UNC93B5-201ENST00000530315 699 ntBASIC13.37□□□□□ -0.27
AP1S3Q96PC3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 AC069544.1-201ENST00000609399 999 ntBASIC13.37□□□□□ -0.27
AP1S3Q96PC3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 NKILA-202ENST00000614771 2598 ntBASIC13.37□□□□□ -0.27
AP1S3Q96PC3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP1S3Q96PC3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
AP1S3Q96PC3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms