Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
CASD1Q96PB1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 AC090164.3-201ENST00000610780 2143 ntBASIC18.7■□□□□ 0.58
CASD1Q96PB1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASD1Q96PB1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CASD1Q96PB1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CASD1Q96PB1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AC074386.1-202ENST00000463561 864 ntBASIC18.68■□□□□ 0.58
CASD1Q96PB1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CASD1Q96PB1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CASD1Q96PB1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 REXO1L11P-201ENST00000620964 1927 ntBASIC18.67■□□□□ 0.58
CASD1Q96PB1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CASD1Q96PB1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 AC023141.13-201ENST00000604991 943 ntBASIC18.67■□□□□ 0.58
CASD1Q96PB1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.67■□□□□ 0.58
CASD1Q96PB1 AC007064.4-201ENST00000637740 555 ntBASIC18.67■□□□□ 0.58
CASD1Q96PB1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms