Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NLRP3Q96P20 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.68■■□□□ 1.06
NLRP3Q96P20 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NLRP3Q96P20 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.67■■□□□ 1.06
NLRP3Q96P20 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.67■■□□□ 1.06
NLRP3Q96P20 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.67■■□□□ 1.06
NLRP3Q96P20 AC074386.1-202ENST00000463561 864 ntBASIC21.67■■□□□ 1.06
NLRP3Q96P20 RFPL4AP1-201ENST00000530883 850 ntBASIC21.67■■□□□ 1.06
NLRP3Q96P20 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NLRP3Q96P20 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NLRP3Q96P20 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.67■■□□□ 1.06
NLRP3Q96P20 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NLRP3Q96P20 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 AP002472.1-201ENST00000577490 586 ntBASIC21.66■■□□□ 1.06
NLRP3Q96P20 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 AC023141.13-201ENST00000604991 943 ntBASIC21.66■■□□□ 1.06
NLRP3Q96P20 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRP3Q96P20 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRP3Q96P20 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 ACTG1P4-201ENST00000425123 1122 ntBASIC21.65■■□□□ 1.06
NLRP3Q96P20 CYMP-203ENST00000474680 1263 ntBASIC21.65■■□□□ 1.06
NLRP3Q96P20 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRP3Q96P20 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRP3Q96P20 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
NLRP3Q96P20 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NLRP3Q96P20 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.64■■□□□ 1.06
NLRP3Q96P20 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NLRP3Q96P20 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NLRP3Q96P20 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.64■■□□□ 1.06
NLRP3Q96P20 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NLRP3Q96P20 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.64■■□□□ 1.06
NLRP3Q96P20 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NLRP3Q96P20 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.64■■□□□ 1.05
NLRP3Q96P20 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NLRP3Q96P20 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NLRP3Q96P20 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NLRP3Q96P20 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NLRP3Q96P20 AL645939.2-201ENST00000427340 991 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms