Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.68■□□□□ 0.58
CALR3Q96L12 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CALR3Q96L12 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CALR3Q96L12 AC002558.1-201ENST00000488906 803 ntBASIC18.68■□□□□ 0.58
CALR3Q96L12 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CALR3Q96L12 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.68■□□□□ 0.58
CALR3Q96L12 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.68■□□□□ 0.58
CALR3Q96L12 AC004263.2-201ENST00000617183 678 ntBASIC18.68■□□□□ 0.58
CALR3Q96L12 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.68■□□□□ 0.58
CALR3Q96L12 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.68■□□□□ 0.58
CALR3Q96L12 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.68■□□□□ 0.58
CALR3Q96L12 AC097374.2-201ENST00000618617 1306 ntBASIC18.68■□□□□ 0.58
CALR3Q96L12 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.67■□□□□ 0.58
CALR3Q96L12 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CALR3Q96L12 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 STARP1-201ENST00000397973 869 ntBASIC18.67■□□□□ 0.58
CALR3Q96L12 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.67■□□□□ 0.58
CALR3Q96L12 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.67■□□□□ 0.58
CALR3Q96L12 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.67■□□□□ 0.58
CALR3Q96L12 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CALR3Q96L12 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 LYSMD4-203ENST00000378904 2122 ntBASIC18.67■□□□□ 0.58
CALR3Q96L12 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CALR3Q96L12 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CALR3Q96L12 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.66■□□□□ 0.58
CALR3Q96L12 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.66■□□□□ 0.58
CALR3Q96L12 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.66■□□□□ 0.58
CALR3Q96L12 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.66■□□□□ 0.58
CALR3Q96L12 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.66■□□□□ 0.58
CALR3Q96L12 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.66■□□□□ 0.58
CALR3Q96L12 AL139327.4-201ENST00000612362 153 ntBASIC18.66■□□□□ 0.58
CALR3Q96L12 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.66■□□□□ 0.58
CALR3Q96L12 AC079602.3-201ENST00000623931 403 ntBASIC18.66■□□□□ 0.58
CALR3Q96L12 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CALR3Q96L12 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.66■□□□□ 0.58
CALR3Q96L12 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CALR3Q96L12 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.66■□□□□ 0.58
CALR3Q96L12 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 AC116353.5-201ENST00000638148 1699 ntBASIC18.66■□□□□ 0.58
CALR3Q96L12 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CALR3Q96L12 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CALR3Q96L12 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CALR3Q96L12 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CALR3Q96L12 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.65■□□□□ 0.58
CALR3Q96L12 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CALR3Q96L12 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CALR3Q96L12 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 IGHGP-201ENST00000390555 1178 ntBASIC18.65■□□□□ 0.58
CALR3Q96L12 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.65■□□□□ 0.58
CALR3Q96L12 COX11P1-201ENST00000489116 835 ntBASIC18.65■□□□□ 0.58
CALR3Q96L12 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CALR3Q96L12 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.65■□□□□ 0.58
CALR3Q96L12 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CALR3Q96L12 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms