Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SPDL1Q96EA4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 MESTP1-201ENST00000404287 994 ntBASIC17.46■□□□□ 0.39
SPDL1Q96EA4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 KRT18P6-201ENST00000555540 1265 ntBASIC17.46■□□□□ 0.39
SPDL1Q96EA4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 AC006058.3-201ENST00000606217 1069 ntBASIC17.46■□□□□ 0.39
SPDL1Q96EA4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SPDL1Q96EA4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SPDL1Q96EA4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SPDL1Q96EA4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPDL1Q96EA4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
SPDL1Q96EA4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 AC096733.2-201ENST00000609937 1394 ntBASIC17.45■□□□□ 0.38
SPDL1Q96EA4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 MIR149-201ENST00000384879 89 ntBASIC17.45■□□□□ 0.38
SPDL1Q96EA4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 C1QBPP2-201ENST00000528754 825 ntBASIC17.45■□□□□ 0.38
SPDL1Q96EA4 RARRES2P10-201ENST00000564312 460 ntBASIC17.45■□□□□ 0.38
SPDL1Q96EA4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 KRT18P55-202ENST00000578578 1546 ntBASIC17.45■□□□□ 0.38
SPDL1Q96EA4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPDL1Q96EA4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 AC093010.1-201ENST00000473625 1624 ntBASIC17.44■□□□□ 0.38
SPDL1Q96EA4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 MIR3180-5-201ENST00000583743 153 ntBASIC17.44■□□□□ 0.38
SPDL1Q96EA4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms