Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FZD10-202ENST00000539839 3282 ntBASIC17.97■□□□□ 0.47
RTP4Q96DX8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTP4Q96DX8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RTP4Q96DX8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 AC011498.5-201ENST00000592027 486 ntBASIC17.96■□□□□ 0.47
RTP4Q96DX8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.96■□□□□ 0.47
RTP4Q96DX8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTP4Q96DX8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTP4Q96DX8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.96■□□□□ 0.46
RTP4Q96DX8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTP4Q96DX8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTP4Q96DX8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTP4Q96DX8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 AC090616.6-201ENST00000582640 721 ntBASIC17.95■□□□□ 0.46
RTP4Q96DX8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RTP4Q96DX8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTP4Q96DX8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RTP4Q96DX8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTP4Q96DX8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms