Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC39Q96DD0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC39Q96DD0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC39Q96DD0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC39Q96DD0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC39Q96DD0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC39Q96DD0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC39Q96DD0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 AC092597.1-201ENST00000487352 616 ntBASIC17.81■□□□□ 0.44
LRRC39Q96DD0 YBX1P2-201ENST00000489612 999 ntBASIC17.81■□□□□ 0.44
LRRC39Q96DD0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC39Q96DD0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 AC099398.1-201ENST00000567919 2776 ntBASIC17.8■□□□□ 0.44
LRRC39Q96DD0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.8■□□□□ 0.44
LRRC39Q96DD0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 COX5BP2-201ENST00000392354 334 ntBASIC17.8■□□□□ 0.44
LRRC39Q96DD0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 AC113347.1-201ENST00000413321 391 ntBASIC17.8■□□□□ 0.44
LRRC39Q96DD0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.8■□□□□ 0.44
LRRC39Q96DD0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC39Q96DD0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 AC084018.2-201ENST00000613093 2607 ntBASIC17.79■□□□□ 0.44
LRRC39Q96DD0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 HBZP1-201ENST00000354915 429 ntBASIC17.79■□□□□ 0.44
LRRC39Q96DD0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.79■□□□□ 0.44
LRRC39Q96DD0 HOMER2P1-201ENST00000455653 964 ntBASIC17.79■□□□□ 0.44
LRRC39Q96DD0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 AC093827.2-201ENST00000512654 315 ntBASIC17.79■□□□□ 0.44
LRRC39Q96DD0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC39Q96DD0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms