Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 PCDHA14-201ENST00000506751 2298 ntBASIC15.67■□□□□ 0.1
RFT1Q96AA3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 AC106886.4-201ENST00000623557 2502 ntBASIC15.66■□□□□ 0.1
RFT1Q96AA3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 MIR1238-201ENST00000408483 83 ntBASIC15.66■□□□□ 0.1
RFT1Q96AA3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 AC008550.1-201ENST00000511500 884 ntBASIC15.66■□□□□ 0.1
RFT1Q96AA3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFT1Q96AA3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFT1Q96AA3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 AL353719.1-201ENST00000566847 864 ntBASIC15.65■□□□□ 0.1
RFT1Q96AA3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 AL023803.3-201ENST00000615559 522 ntBASIC15.65■□□□□ 0.1
RFT1Q96AA3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.65■□□□□ 0.1
RFT1Q96AA3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFT1Q96AA3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
RFT1Q96AA3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
RFT1Q96AA3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RFT1Q96AA3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.64■□□□□ 0.09
RFT1Q96AA3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
RFT1Q96AA3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFT1Q96AA3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.64■□□□□ 0.09
RFT1Q96AA3 AC133963.1-201ENST00000504166 1679 ntBASIC15.64■□□□□ 0.09
RFT1Q96AA3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFT1Q96AA3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.64■□□□□ 0.09
RFT1Q96AA3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms