Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 MYCLP1-201ENST00000372451 1075 ntBASIC16.97■□□□□ 0.31
UBE2E3Q969T4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 AC122714.2-201ENST00000502787 707 ntBASIC16.97■□□□□ 0.31
UBE2E3Q969T4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 AC009533.2-201ENST00000543664 586 ntBASIC16.97■□□□□ 0.31
UBE2E3Q969T4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 AC091076.1-201ENST00000610741 619 ntBASIC16.97■□□□□ 0.31
UBE2E3Q969T4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.97■□□□□ 0.31
UBE2E3Q969T4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 FAM220CP-201ENST00000395253 831 ntBASIC16.96■□□□□ 0.31
UBE2E3Q969T4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 AC007967.3-201ENST00000434308 558 ntBASIC16.96■□□□□ 0.31
UBE2E3Q969T4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 Z69720.1-201ENST00000601483 472 ntBASIC16.96■□□□□ 0.31
UBE2E3Q969T4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 AC010460.3-201ENST00000511359 1579 ntBASIC16.96■□□□□ 0.31
UBE2E3Q969T4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBE2E3Q969T4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.96■□□□□ 0.3
UBE2E3Q969T4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.96■□□□□ 0.3
UBE2E3Q969T4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBE2E3Q969T4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBE2E3Q969T4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 AL845331.1-201ENST00000424978 1190 ntBASIC16.95■□□□□ 0.3
UBE2E3Q969T4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 AC103564.2-201ENST00000432853 1299 ntBASIC16.95■□□□□ 0.3
UBE2E3Q969T4 DRAXINP1-201ENST00000437611 948 ntBASIC16.95■□□□□ 0.3
UBE2E3Q969T4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 KRT18P35-201ENST00000510488 1269 ntBASIC16.95■□□□□ 0.3
UBE2E3Q969T4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 IGHV3-52-201ENST00000519770 353 ntBASIC16.95■□□□□ 0.3
UBE2E3Q969T4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.95■□□□□ 0.3
UBE2E3Q969T4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2E3Q969T4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms