Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 AC023141.13-201ENST00000604991 943 ntBASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 AC007064.4-201ENST00000637740 555 ntBASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF4Q8WZA2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 AP000974.1-201ENST00000623909 2387 ntBASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 ACTG1P14-201ENST00000446382 1122 ntBASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 AC027612.4-201ENST00000605371 583 ntBASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 AP000997.3-201ENST00000623333 2250 ntBASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RAPGEF4Q8WZA2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAPGEF4Q8WZA2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 ACTG1P4-201ENST00000425123 1122 ntBASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAPGEF4Q8WZA2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.95■■□□□ 1.27
RAPGEF4Q8WZA2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAPGEF4Q8WZA2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms