Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 DGCR10-201ENST00000609839 495 ntBASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.54■□□□□ 0.4
CKAP2Q8WWK9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 RNA5SP413-201ENST00000516373 109 ntBASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 AC010240.3-201ENST00000607688 395 ntBASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 KRT8P47-201ENST00000604727 1398 ntBASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 AC092053.1-201ENST00000605787 1936 ntBASIC17.53■□□□□ 0.4
CKAP2Q8WWK9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 AC022188.1-201ENST00000620960 1664 ntBASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 AC005104.2-201ENST00000427818 678 ntBASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 AC008687.5-201ENST00000593746 558 ntBASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.52■□□□□ 0.4
CKAP2Q8WWK9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms