Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 AC026790.2-201ENST00000606282 430 ntBASIC17.88■□□□□ 0.45
PTCD2Q8WV60 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.88■□□□□ 0.45
PTCD2Q8WV60 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 AC233702.3-201ENST00000578656 1387 ntBASIC17.88■□□□□ 0.45
PTCD2Q8WV60 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCD2Q8WV60 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 AC096633.1-201ENST00000422446 749 ntBASIC17.87■□□□□ 0.45
PTCD2Q8WV60 AL450487.1-201ENST00000426799 995 ntBASIC17.87■□□□□ 0.45
PTCD2Q8WV60 AC005104.2-201ENST00000427818 678 ntBASIC17.87■□□□□ 0.45
PTCD2Q8WV60 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 UNC93B7-201ENST00000509439 705 ntBASIC17.87■□□□□ 0.45
PTCD2Q8WV60 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 PRELID1P1-202ENST00000567272 903 ntBASIC17.87■□□□□ 0.45
PTCD2Q8WV60 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCD2Q8WV60 AL023806.1-201ENST00000603994 1649 ntBASIC17.87■□□□□ 0.45
PTCD2Q8WV60 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 GUSBP12-201ENST00000513727 720 ntBASIC17.86■□□□□ 0.45
PTCD2Q8WV60 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 AC074051.2-201ENST00000565115 352 ntBASIC17.86■□□□□ 0.45
PTCD2Q8WV60 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 AL732292.2-201ENST00000609649 430 ntBASIC17.86■□□□□ 0.45
PTCD2Q8WV60 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCD2Q8WV60 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms