Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 AC113404.2-201ENST00000507884 177 ntBASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCHCR1Q8TD31 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 MIR1224-201ENST00000408193 85 ntBASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 SPDYE15P-201ENST00000424157 909 ntBASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 PVRIG2P-201ENST00000435460 978 ntBASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 DDX43P3-201ENST00000441064 443 ntBASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.41■□□□□ 0.54
CCHCR1Q8TD31 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AC112907.2-201ENST00000448639 330 ntBASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 CROCCP2-202ENST00000412962 2773 ntBASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.4■□□□□ 0.54
CCHCR1Q8TD31 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.39■□□□□ 0.54
CCHCR1Q8TD31 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CCHCR1Q8TD31 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCHCR1Q8TD31 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCHCR1Q8TD31 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CCHCR1Q8TD31 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCHCR1Q8TD31 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCHCR1Q8TD31 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CCHCR1Q8TD31 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.39■□□□□ 0.53
CCHCR1Q8TD31 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.39■□□□□ 0.53
CCHCR1Q8TD31 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCHCR1Q8TD31 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms