Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 FAM220CP-201ENST00000395253 831 ntBASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AC005104.2-201ENST00000427818 678 ntBASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 LINC00265-3P-201ENST00000447588 903 ntBASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AC005336.2-201ENST00000593183 939 ntBASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AC092329.2-201ENST00000598402 547 ntBASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 NPAP1P7-201ENST00000613027 823 ntBASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 AC067852.2-201ENST00000590513 2313 ntBASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRFBP1Q8NEF9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 UPK3BP1-201ENST00000428678 509 ntBASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 AC007967.3-201ENST00000434308 558 ntBASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 KRT17P6-201ENST00000453795 1220 ntBASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 MINOS1P3-201ENST00000457048 203 ntBASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 AC012615.1-201ENST00000565797 1299 ntBASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 LINC00304-203ENST00000565008 1864 ntBASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 AL355312.1-201ENST00000407115 2176 ntBASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SRFBP1Q8NEF9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.83■□□□□ 0.29
SRFBP1Q8NEF9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SRFBP1Q8NEF9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SRFBP1Q8NEF9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 MYCLP1-201ENST00000372451 1075 ntBASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms