Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RETREG2Q8NC44 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 HNRNPDP1-201ENST00000439535 754 ntBASIC19.96■□□□□ 0.79
RETREG2Q8NC44 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.96■□□□□ 0.79
RETREG2Q8NC44 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 LTB4R2-202ENST00000528054 3092 ntBASIC19.96■□□□□ 0.79
RETREG2Q8NC44 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RETREG2Q8NC44 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AC138932.1-201ENST00000534164 6830 ntBASIC19.95■□□□□ 0.78
RETREG2Q8NC44 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AC090340.1-201ENST00000620778 4980 ntBASIC19.95■□□□□ 0.78
RETREG2Q8NC44 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AP001269.4-201ENST00000609611 512 ntBASIC19.95■□□□□ 0.78
RETREG2Q8NC44 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RETREG2Q8NC44 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 FAM220CP-201ENST00000395253 831 ntBASIC19.94■□□□□ 0.78
RETREG2Q8NC44 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms