Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 AL391807.1-203ENST00000604392 2365 ntBASIC18.33■□□□□ 0.52
CCDC89Q8N998 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 NKILA-202ENST00000614771 2598 ntBASIC18.33■□□□□ 0.52
CCDC89Q8N998 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC89Q8N998 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC89Q8N998 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 COX11P1-201ENST00000489116 835 ntBASIC18.31■□□□□ 0.52
CCDC89Q8N998 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC89Q8N998 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC89Q8N998 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC89Q8N998 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 KRT8P47-201ENST00000604727 1398 ntBASIC18.3■□□□□ 0.52
CCDC89Q8N998 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC89Q8N998 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 AC011676.5-201ENST00000624864 2660 ntBASIC18.3■□□□□ 0.52
CCDC89Q8N998 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC89Q8N998 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC89Q8N998 KRT18P48-201ENST00000434763 852 ntBASIC18.3■□□□□ 0.52
CCDC89Q8N998 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCDC89Q8N998 AC079602.3-201ENST00000623931 403 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms