Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC33Q8N5R6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 TP73-AS1-207ENST00000624167 988 ntBASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC33Q8N5R6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC33Q8N5R6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC33Q8N5R6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 AL590627.1-203ENST00000421194 1026 ntBASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms