Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AC099548.2-209ENST00000480264 625 ntBASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AC244093.1-201ENST00000610837 814 ntBASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 AC100803.2-201ENST00000562459 1963 ntBASIC24.18■■□□□ 1.46
LTBP4Q8N2S1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 AC234783.1-201ENST00000441761 496 ntBASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 CHCHD2P3-201ENST00000603038 451 ntBASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 TEX28P1-201ENST00000613479 1221 ntBASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 TEX28P2-201ENST00000617764 1221 ntBASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTBP4Q8N2S1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 AL139099.5-201ENST00000635274 300 ntBASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC24.16■■□□□ 1.46
LTBP4Q8N2S1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 MIR4515-201ENST00000584082 81 ntBASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 AC007431.3-201ENST00000623221 587 ntBASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTBP4Q8N2S1 PC-208ENST00000529047 1607 ntTSL 3 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 HMGA1P7-201ENST00000406908 502 ntBASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 AC109635.5-201ENST00000533593 962 ntBASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
LTBP4Q8N2S1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.14■■□□□ 1.45
LTBP4Q8N2S1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTBP4Q8N2S1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
LTBP4Q8N2S1 WASH6P-202ENST00000359512 1437 ntBASIC24.14■■□□□ 1.45
LTBP4Q8N2S1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
LTBP4Q8N2S1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 AC027307.2-201ENST00000591252 911 ntBASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LTBP4Q8N2S1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms