Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SLX4Q8IY92 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SLX4Q8IY92 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.29■■□□□ 1
SLX4Q8IY92 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SLX4Q8IY92 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SLX4Q8IY92 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.29■■□□□ 1
SLX4Q8IY92 TFAMP1-201ENST00000412727 736 ntBASIC21.29■■□□□ 1
SLX4Q8IY92 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.29■■□□□ 1
SLX4Q8IY92 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.29■■□□□ 1
SLX4Q8IY92 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLX4Q8IY92 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.28■■□□□ 1
SLX4Q8IY92 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
SLX4Q8IY92 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.28■■□□□ 1
SLX4Q8IY92 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.28■■□□□ 1
SLX4Q8IY92 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.28■■□□□ 1
SLX4Q8IY92 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.28■■□□□ 1
SLX4Q8IY92 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.28■■□□□ 1
SLX4Q8IY92 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.28■■□□□ 1
SLX4Q8IY92 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.28■■□□□ 1
SLX4Q8IY92 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLX4Q8IY92 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.27■■□□□ 1
SLX4Q8IY92 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLX4Q8IY92 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLX4Q8IY92 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.27■■□□□ 1
SLX4Q8IY92 AL592309.1-201ENST00000443127 649 ntBASIC21.27■■□□□ 1
SLX4Q8IY92 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SLX4Q8IY92 RNA5SP421-201ENST00000516864 134 ntBASIC21.27■■□□□ 1
SLX4Q8IY92 AC243562.1-201ENST00000560672 389 ntBASIC21.27■■□□□ 1
SLX4Q8IY92 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
SLX4Q8IY92 AC116407.2-201ENST00000613639 860 ntBASIC21.27■■□□□ 1
SLX4Q8IY92 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.27■■□□□ 1
SLX4Q8IY92 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SLX4Q8IY92 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLX4Q8IY92 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.27■■□□□ 1
SLX4Q8IY92 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.27■■□□□ 1
SLX4Q8IY92 AC129492.6-201ENST00000611383 1305 ntBASIC21.27■■□□□ 1
SLX4Q8IY92 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLX4Q8IY92 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLX4Q8IY92 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SLX4Q8IY92 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.27■■□□□ 1
SLX4Q8IY92 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLX4Q8IY92 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLX4Q8IY92 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.27■□□□□ 0.99
SLX4Q8IY92 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.27■□□□□ 0.99
SLX4Q8IY92 AC007274.1-201ENST00000439805 662 ntBASIC21.27■□□□□ 0.99
SLX4Q8IY92 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLX4Q8IY92 AC079140.1-201ENST00000508039 487 ntBASIC21.27■□□□□ 0.99
SLX4Q8IY92 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SLX4Q8IY92 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.27■□□□□ 0.99
SLX4Q8IY92 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 MYCLP1-201ENST00000372451 1075 ntBASIC21.26■□□□□ 0.99
SLX4Q8IY92 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.26■□□□□ 0.99
SLX4Q8IY92 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLX4Q8IY92 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SLX4Q8IY92 AC002056.1-201ENST00000395613 760 ntBASIC21.25■□□□□ 0.99
SLX4Q8IY92 CNN2P2-201ENST00000443536 909 ntBASIC21.25■□□□□ 0.99
SLX4Q8IY92 CNN2P3-201ENST00000450201 906 ntBASIC21.25■□□□□ 0.99
SLX4Q8IY92 MEIS3P1-201ENST00000495167 958 ntBASIC21.25■□□□□ 0.99
SLX4Q8IY92 DUX4L17-201ENST00000557360 1267 ntBASIC21.25■□□□□ 0.99
SLX4Q8IY92 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLX4Q8IY92 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLX4Q8IY92 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.25■□□□□ 0.99
SLX4Q8IY92 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SLX4Q8IY92 AL136317.3-201ENST00000618497 906 ntBASIC21.25■□□□□ 0.99
SLX4Q8IY92 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.25■□□□□ 0.99
SLX4Q8IY92 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.25■□□□□ 0.99
SLX4Q8IY92 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.25■□□□□ 0.99
SLX4Q8IY92 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLX4Q8IY92 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.25■□□□□ 0.99
SLX4Q8IY92 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms