Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.54■□□□□ 0.4
APLFQ8IW19 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.54■□□□□ 0.4
APLFQ8IW19 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
APLFQ8IW19 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.54■□□□□ 0.4
APLFQ8IW19 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.54■□□□□ 0.4
APLFQ8IW19 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
APLFQ8IW19 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.54■□□□□ 0.4
APLFQ8IW19 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.54■□□□□ 0.4
APLFQ8IW19 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
APLFQ8IW19 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
APLFQ8IW19 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
APLFQ8IW19 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.54■□□□□ 0.4
APLFQ8IW19 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
APLFQ8IW19 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.54■□□□□ 0.4
APLFQ8IW19 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APLFQ8IW19 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.54■□□□□ 0.4
APLFQ8IW19 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
APLFQ8IW19 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
APLFQ8IW19 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.53■□□□□ 0.4
APLFQ8IW19 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.53■□□□□ 0.4
APLFQ8IW19 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.53■□□□□ 0.4
APLFQ8IW19 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
APLFQ8IW19 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
APLFQ8IW19 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.53■□□□□ 0.4
APLFQ8IW19 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
APLFQ8IW19 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.53■□□□□ 0.4
APLFQ8IW19 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.52■□□□□ 0.4
APLFQ8IW19 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.52■□□□□ 0.4
APLFQ8IW19 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
APLFQ8IW19 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.52■□□□□ 0.4
APLFQ8IW19 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
APLFQ8IW19 AC012313.10-201ENST00000623509 926 ntBASIC17.52■□□□□ 0.4
APLFQ8IW19 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
APLFQ8IW19 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.52■□□□□ 0.4
APLFQ8IW19 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APLFQ8IW19 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
APLFQ8IW19 LINC00602-201ENST00000629776 2065 ntBASIC17.52■□□□□ 0.39
APLFQ8IW19 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
APLFQ8IW19 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms