Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 AC120498.8-201ENST00000614275 531 ntBASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.02■□□□□ 0.16
CROCCP3Q8IVE0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CROCCP3Q8IVE0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 AL365203.3-201ENST00000609742 2057 ntBASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 C8orf49-201ENST00000525043 1968 ntBASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 C1QL1P1-201ENST00000568105 661 ntBASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CROCCP3Q8IVE0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 PHGDH-209ENST00000641074 1780 ntBASIC16■□□□□ 0.15
CROCCP3Q8IVE0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 AC060834.1-201ENST00000443027 2032 ntBASIC16■□□□□ 0.15
CROCCP3Q8IVE0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms