Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 PI4KAP1-204ENST00000612579 1703 ntBASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS4Q8IUM7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS4Q8IUM7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 AP000997.3-201ENST00000623333 2250 ntBASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS4Q8IUM7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 CXCL1P1-201ENST00000502804 216 ntBASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 AP000344.2-201ENST00000512987 629 ntBASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 AC027612.4-201ENST00000605371 583 ntBASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS4Q8IUM7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms