Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 AC006213.4-201ENST00000616184 634 ntBASIC17.79■□□□□ 0.44
PACS2Q86VP3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 AL513523.2-202ENST00000427283 2040 ntBASIC17.79■□□□□ 0.44
PACS2Q86VP3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 AL138688.1-201ENST00000624851 1594 ntBASIC17.79■□□□□ 0.44
PACS2Q86VP3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 AC026471.5-201ENST00000615068 467 ntBASIC17.78■□□□□ 0.44
PACS2Q86VP3 AL445675.2-201ENST00000620291 557 ntBASIC17.78■□□□□ 0.44
PACS2Q86VP3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PACS2Q86VP3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PACS2Q86VP3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PACS2Q86VP3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PACS2Q86VP3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PACS2Q86VP3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PACS2Q86VP3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PACS2Q86VP3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 AC131212.4-201ENST00000623606 975 ntBASIC17.77■□□□□ 0.44
PACS2Q86VP3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 AL031985.4-201ENST00000642138 673 ntBASIC17.77■□□□□ 0.44
PACS2Q86VP3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PACS2Q86VP3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PACS2Q86VP3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PACS2Q86VP3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PACS2Q86VP3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PACS2Q86VP3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PACS2Q86VP3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PACS2Q86VP3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.77■□□□□ 0.43
PACS2Q86VP3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PACS2Q86VP3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PACS2Q86VP3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.77■□□□□ 0.43
PACS2Q86VP3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PACS2Q86VP3 AL096828.2-201ENST00000567259 1965 ntBASIC17.77■□□□□ 0.43
PACS2Q86VP3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 AL355312.1-201ENST00000407115 2176 ntBASIC17.76■□□□□ 0.43
PACS2Q86VP3 AC092068.3-201ENST00000587894 2016 ntBASIC17.76■□□□□ 0.43
PACS2Q86VP3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS2Q86VP3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.76■□□□□ 0.43
PACS2Q86VP3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms