Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 ATP5G1P1-201ENST00000448724 379 ntBASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC093827.2-201ENST00000512654 315 ntBASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC140113.3-201ENST00000605663 199 ntBASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC141257.4-201ENST00000634557 245 ntBASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC136944.6-201ENST00000634818 245 ntBASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 LINC00602-201ENST00000629776 2065 ntBASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 AC113404.2-201ENST00000507884 177 ntBASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 AL031432.5-201ENST00000641059 760 ntBASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.38□□□□□ -0.59
MRPL55Q7Z7F7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms